REPAIRtoire - a database of DNA repair pathways

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DNA Damage

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Full name Abbreviation
1,N2-etheno-2'-deoxyguanosine-5'-monophosphate 1,N2-ethenoG
1,N6-etheno-2'-deoxyadenosine-5'-monophosphate 1,N6-ethenoA
1-ethyl-2'-deoxyadenosine-5'-monophosphate 1eA
1-hydroxyethyl-2'-deoxyadenosine-5'-monophosphate 1heA
1-hydroxypropyl-2'-deoxyadenosine-5'-monophosphate 1hpA
1-methyl-2'-deoxyadenosine-5'-monophosphate 1mA
1-methyl-2'-deoxyguanosine-5'-monophosphate 1mG
1-propyl-2'-deoxyadenosine-5'-monophosphate 1pA
2'-deoxyribonolactone 2-dL
2'-deoxyuridine-5'-monophosphate dU
2,6-diamino-4-hydroxy-5-formamidopyrimidine-2'-deoxynucleoside-5'-monophosphate FapyG
2-methyl-2'-deoxyguanosine-5'-monophosphate 2mG
3,N4-etheno-2'-deoxycytidine-5'-monophosphate 3,N4-ethenoC
3-ethyl-2'-deoxycytidine-5'-monophosphate 3eC
3-hydroxyethyl-2'-deoxycytidine-5'-monophosphate 3heC
3-hydroxypropyl-2'-deoxycytidine-5'-monophosphate 3hpC
3-methyl-2'-deoxyadenosine-5'-monophosphate 3mA
3-methyl-2'-deoxycytidine-5'-monophosphate 3mC
3-methyl-2'-deoxyguanosine-5'-monophosphate 3mG
3-methyl-2'-deoxythymidine-5'-monophosphate 3mT
3-propyl-2'-deoxycytidine-5'-monophosphate 3pC
4,6-diamino-5-formamidopyrimidine-2'-deoxynucleoside-5'-monophosphate FapyA
4-methyl-2'-deoxycytidine-5'-monophosphate 4mC
5'-AMP termini 5'-AMP termini
5,6-dihydroxy-5,6-dihydrothymidine-5'-monophosphate thymidine glycol
6-methyl-2'-deoxyadenosine-5'-monophosphate 6mA
7-methyl-2'-deoxyadenosine-5'-monophosphate 7mA
7-methyl-2'-deoxyguanosine-5'-monophosphate 7mG
8-methyl-2'-deoxyguanosine-5'-monophosphate 8mG
8-oxo-2'-deoxyguanosine-5'-monophosphate 8-oxoG
Dewar isomer form of TT dinucleoside photoproduct Dewar TT
N2,3-etheno-2'-deoxyguanosine-5'-monophosphate N2,3-ethenoG
O2-methyl-2'-deoxythymidine-5'-monophosphate O2mT
O4-methyl-2'-deoxythymidine-5'-monophosphate O4mT
O6-alkyl-2'-deoxyguanosine-5'-monophosphate O6-alkylG
O6-methyl-2'-deoxyguanosine-5'-monophosphate O6mG
Ultra violet uv
abasic site abasic site
abasic site (missing A) abasic site [A]
abasic site (missing C) abasic site [C]
abasic site (missing G) abasic site [G]
abasic site (missing U) abasic site [U]
alkylated adducts alkylated adducts
apurinic site AP site
base crosslink crosslink
base deletion frameshift base deletion frameshift
base dimerization base dimerization
base insertion frameshift base insertion frameshift
base mismatch base mismatch
base mismatch (A-A) AA mismatch
base mismatch (A-G) AG mismatch
base mismatch (C-A) CA mismatch
base mismatch (C-C) CC mismatch
base mismatch (C-T) CT mismatch
base mismatch (G-A) GA mismatch
base mismatch (G-G) GG mismatch
base mismatch (G-T) GT mismatch
base mismatch (T-C) TC mismatch
base mismatch (T-G) TG mismatch
base mismatch (T-T) TT mismatch
benzopyrene diol epoxide adduct BPDE
bulky adduct bulky adduct
cyclobutane pyrimidine nucleoside phosphate dimer CPD
cyclobutane pyrimidine nucleoside phosphate dimer cyclobutane pyrimidine dimer
dinucleoside monophosphate 6-4 photoproduct 6-4PP
dipyrimidine nucleoside phosphate dimer pyrimidine dimer
dithymidine nucleoside phosphate dimer thymidine dimer
double strand break DSB
interstrand crosslink interstrand crosslink
large deletion loop large deletion loop
large insertion loop large insertion loop
methylphosphotriester-dinucleoside phosphate OmP
misc. base adducts base adducts
misc. methylations XmX
misc. methylations methylations
nick nick
partially single-stranded DNA partially single-stranded DNA
protein-DNA crosslink protein-DNA crosslink
single strand break between 5'P and 3'OH strand break with 3'OH
single strand break between 5'P and 3'OH strand break with 5'P
single strand break between P and 3'O strand break with 3'P
single strand break between P and 5'O strand break with 5'OH
single strand gap single strand gap
single-stranded DNA break single strand break
small deletion loop small deletion loop
small insertion loop small insertion loop
spore photoproducts spore photoproducts
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