REPAIRtoire - a database of DNA repair pathways

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Bujnicki Lab Homepage

PHR1

Protein FULL name:

PHR1 (PHOTOLYASE 1); DNA photolyase [Arabidopsis thaliana].


PHR1 (Arabidopsis thaliana) is product of expression of PHR1 gene.





NCBI GenPept GI number(s): 18391386
Species: Arabidopsis thaliana

Links to other databases:

Database ID Link
Uniprot Q9SB00 Q9SB00
PFAM: - Q9SB00 (Link - using uniprot id)
InterPro: growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like
alpha/beta/alpha sandwich fold (IPR014729)
N-terminal (IPR006050)
(IPR005101)
(IPR008148); Has 1496 Blast hits to 1492 proteins
growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like
alpha/beta/alpha sandwich fold (IPR014729)
N-terminal (IPR006050)
(IPR005101)
(IPR008148); Has 1496 Blast hits to 1492 proteins
CATH: - -
SCOP: - -
PDB: - -


Protein sequence:
MASTVSVQPGRIRILKKGSWQPLDQTVGPVVYWMFRDQRLKDNWALIHAV
DLANRTNAPVAVVFNLFDQFLDAKARQLGFMLKGLRQLHHQIDSLQIPFF
LLQGDAKETIPNFLTECGASHLVTDFSPLREIRRCKDEVVKRTSDSLAIH
EVDAHNVVPMWAASSKLEYSARTIRGKINKLLPDYLIEFPKLEPPKKKWT
GMMDKKLVDWDSLIDKVVREGAEVPEIEWCVPGEDAGIEVLMGNKDGFLT
KRLKNYSTDRNNPIKPKALSGLSPYLHFGQVSAQRCALEARKVRSTSPQA
VDTFLEELIVRRELSDNFCYYQPHYDSLKGAWEWARKSLMDHASDKREHI
YSLEQLEKGLTADPLEMVYQGKMHGFMRMYWAKKILEWTKGPEEALSISI
YLNNKYEIDGRDPSGYVGCMWSICGVHDQGWKERPVFGKIRYMNYAGCKR
KFNVDSYISYVKSLVSVTKKKRKAEEQLTRDSVDPKITIV

PHR1 (Arabidopsis thaliana) is able to recognize following damages:
References:

Title Authors Journal
Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, Ecker JR, Palm CJ, Federspiel NA, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman CL, Brooks SY, Buehler E, Chan A, Chao Q, Chen H, Cheuk RF, Chin CW, Chung MK, Conn L, Conway AB, Conway AR, Creasy TH, Dewar K, Dunn P, Etgu P, Feldblyum TV, Feng J, Fong B, Fujii CY, Gill JE, Goldsmith AD, Haas B, Hansen NF, Hughes B, Huizar L, Hunter JL, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim CJ, Koo HL, Kremenetskaia I, Kurtz DB, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee JM, Lenz CA, Li JH, Li Y, Lin X, Liu SX, Liu ZA, Luros JS, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman WC, Osborne BI, Pai G, Peterson J, Pham PK, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg SL, Schwartz JR, Shinn P, Southwick AM, Sun H, Tallon LJ, Tambunga G, Toriumi MJ, Town CD, Utterback T, Van Aken S, Vaysberg M, Vysotskaia VS, Walker M, Wu D, Yu G, Fraser CM, Venter JC, Davis RW Nature Dec. 14, 2000


Last modification of this entry: Oct. 13, 2010.

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