REPAIRtoire - a database of DNA repair pathways

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Blm

Protein FULL name:

Bloom syndrome protein homolog isoform 2 [Mus musculus].


Blm (Mus musculus) is product of expression of Blm gene.






FUNCTION: Participates in DNA replication and repair. Exhibits a magnesium-dependent ATP-dependent DNA-helicase activity that unwinds single- and double-stranded DNA in a 3'-5' direction.

CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate.

SUBUNIT: Part of the BRCA1-associated genome surveillance complex (BASC), which contains BRCA1, MSH2, MSH6, MLH1, ATM, BLM, PMS2 and the RAD50-MRE11-NBS1 protein complex. This association could be a dynamic process changing throughout the cell cycle and within subnuclear domains. Interacts with ubiquitinated FANCD2. Interacts with RMI complex. Interacts directly with RMI1 component of RMI complex (By similarity).

SUBCELLULAR LOCATION: Nucleus (By similarity).

TISSUE SPECIFICITY: Highly expressed in testis 12-14 days after birth (corresponding to the pachytene phase) and at much lower levels in brain, heart, liver, lung, thymus, kidney and spleen.

PTM: Phosphorylated in response to DNA damage. Phosphorylation requires the FANCA-FANCC-FANCE-FANCF-FANCG protein complex, as well as the presence of RMI1 (By similarity).

SIMILARITY: Belongs to the helicase family. RecQ subfamily.

SIMILARITY: Contains 1 helicase ATP-binding domain.

SIMILARITY: Contains 1 helicase C-terminal domain.

SIMILARITY: Contains 1 HRDC domain.


NCBI GenPept GI number(s): 110225360
Species: Mus musculus

Links to other databases:

Database ID Link
Uniprot O88700 O88700
PFAM: - O88700 (Link - using uniprot id)
InterPro: - O88700 (Link - using uniprot id)
CATH: - -
SCOP: - -
PDB: - -


Protein sequence:
MAAVPLNNLQEQLQRHSARKLNNQPSLSKPKSLGFTFKKKTSEGDVSVTS
VSVVKTPALSDKDVNVSEAFSFTESPLHKPKQQAKIEGFFKHFPGRQQSK
GTCSEPSLPATVQTAQDTLCTTPKTPTAKKLPVAVFKKLEFSSSADSLSD
WADMDDFDMSASDAFASLAKNPATRVSTAQKMKKTKRNFFKPPPRKANAV
KTDLTPPSPECLQVDLTKESEEEEEEEEEAEGADCLSRDVICIDNDSASE
ELTEKDTQESQSLKAHLGAERGDSEKKSHEDEAVFHSVQNTEYFEHNDND
YDIDFVPPSPEEIISTASSSLKCSSMLKDLDDSDKEKGILSTSEELLSKP
EEMTTHKSDAGTSKDCDAQQIRIQQQLIHVMEHICKLVDTVPTDELEALN
CGTELLQQRNIRRKLLAEAGFNGNDVRLLGSLWRHRPDSLDNTVQGDSCP
VGHPNKELNSPYLLSHSPSTEECLPTTTPGKTGFSATPKNLFERPLLNSH
LQKSFVSSNWAETPRMENRNESTDFPGSVLTSTTVKAQSKQAASGWNVER
HGQASYDIDNFNIDDFDDDDDDDDWENIMHNFPASKSSTATYPPIKEGGP
VKSLSERISSAKAKFLPVVSTAQNTNLSESIQNCSDKLAQNLSSKNPKHE
HFQSLNFPHTKEMMKIFHKKFGLHNFRTNQLEAINAALLGEDCFILMPTG
GGKSLCYQLPACVSPGVTIVISPLRSLIVDQVQKLTSFDIPATYLTGDKT
DSEAANIYLQLSKKDPIIKLLYVTPEKVCASNRLISTLENLYERKLLARF
VIDEAHCVSQWGHDFRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDIL
TQLKILRPQVFSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKHHPYDSGI
IYCLSRRECDTMADTLQREGLAALAYHAGLSDSARDEVQHKWINQDNCQV
ICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEISHCVLF
YTYHDVTRLKRLIMMEKDGNYHTKETHVNNLYSMVHYCENITECRRIQLL
AYFGEKGFNPDFCKKYPDVSCDNCCKTKDYKTKDVTDDVKNIIRFVQEHS
SSPGTRNIGPAGRFTLNMLVDIFLGSKSAKVKSGIFGKGTTYSRHNAERL
FKKLILDKILDEDLYINANDQPIAYVMLGTKAHSVLSGHLKVDFMETENS
SSIKKQKALVAKVSQREEVVKKCLGELTEVCKLLGKVFGVHYFNIFNTAT
LKKLAESLSSDPEVLLQIDGVTEDKLEKYGAEVIPVLQKYSEWTVPAEDG
SPGARGAPEDTEEEEEEAPVSSHYFANQTRNERKRKKMSATHKPKRRRTS
YGGFRAKGGSTTCRKTTSKSKFYGVTGSRSASCASQATSSASRKLGIMAP
PKPVNRTFLRPSYAFS

Blm (Mus musculus) belongs to following protein families:
References:

Title Authors Journal
cDNA cloning of mouse BLM gene, the homologue to human Bloom's syndrome gene, which is highly expressed in the testis at the mRNA level. Seki T, Wang WS, Okumura N, Seki M, Katada T, Enomoto T Biochim Biophys Acta July 9, 1998
Point mutations causing Bloom's syndrome abolish ATPase and DNA helicase activities of the BLM protein. Bahr A, De Graeve F, Kedinger C, Chatton B Oncogene Nov. 19, 1998


Last modification of this entry: Oct. 6, 2010.

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